New technique helps identify proteins involved in immune response

A new technique developed at the University of Cambridge allows researchers to identify clusters of proteins on immune cells which are key to fighting off the body’s invaders.

There are many problems in cell-biology where we would like to identify proteins that group together on the cell surface
- Tony Jackson

When our bodies are under attack from foreign organisms, such as bacteria and viruses, our immune system orchestrates a complex fight-back involving many separate parts. One important component of this response is a type of cell called the B-lymphocyte – it is this cell that is at the forefront of our defence as it identifies and attempts to neutralise invaders.

The B-lymphocyte produces a protein called the B-cell receptor on its surface. The receptor recognises and attaches itself to molecules from the invading organisms, known as antigens. This triggers the B-lymphocyte to divide and to release specialised proteins called antibodies which neutralise the antigens.

There are many aspects of this process that are still not well understood. One reason is because the B-cell receptor does not exist in isolation on the B-lymphocyte surface. Rather, it forms localised clusters together with a number of ‘molecular neighbours’. It is these local interactions that control how the lymphocytes divide and replicate and determine the strength of the antibody response. A better understanding of these interactions could ultimately lead to better control of the immune response – for example in vaccine development. However, the molecular contacts within the clusters are relatively weak, and so they are technically difficult to identify.

Now, in an international collaboration, scientists at the University of Cambridge’s Department of Biochemistry, the Cambridge Centre for Proteomics and the Institute of Biophysics in Beijing have developed a technique that allows some of these molecules to be detected. The experiments were performed primarily by Li Xue-Wen in Beijing and Dr Jo Rees in Cambridge, and are published in the Journal of Biological Chemistry. The method enables proteins in the immediate vicinity of the B-cell receptor to be chemically tagged in such a way that they can be more easily isolated. The tagged molecules can then be identified using a method called mass spectrometry.


Read the full story


Image: B-lymphocyte
Credit: Bruce Blaus


Reproduced courtesy of the University of Cambridge
_______________________________________



Looking for something specific?